Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recj-like exonuclease, contains dnaj-type zn finger domain | SAMN04487947_2053 | Not Available | Positive | 1955994 - 1958186 | 79259.3 |
| predicted transcriptional regulator, contains hth domain | SAMN04487947_2054 | Not Available | Negative | 1958237 - 1959103 | 31868.1 |
| methyltransferase domain-containing protein | SAMN04487947_2055 | Not Available | Positive | 1959240 - 1960355 | 40419.9 |
| elongator complex protein 3 | SAMN04487947_2056 | Not Available | Positive | 1960545 - 1962218 | 63354.9 |
| short c-terminal domain-containing protein | SAMN04487947_2057 | Not Available | Positive | 1962554 - 1962916 | 12819.1 |
| small-conductance mechanosensitive channel | SAMN04487947_2058 | Not Available | Positive | 1963044 - 1964240 | 42158.7 |
| predicted n-acyltransferase, gnat family | SAMN04487947_2059 | Not Available | Negative | 1964327 - 1964848 | 19287.7 |
| hypothetical protein | SAMN04487947_2060 | Not Available | Positive | 1964930 - 1965379 | 15190.8 |
| predicted component of the ribosome quality control (rqc) complex, yloa/tae2 family, contains fibronectin-binding (fbpa) and duf814 domains | SAMN04487947_2061 | Not Available | Positive | 1965439 - 1967550 | 79403.2 |
| protein of unknown function | SAMN04487947_2062 | Not Available | Positive | 1967736 - 1968452 | 24723.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
