Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Halogeometricum rufum strain CGMCC 1.7736
Accession NumberFOYT00000000.1
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487947_0010 | Not Available | + | 12056 - 12463 | 14015.7 |
| amphi-trp domain-containing protein | SAMN04487947_0011 | Not Available | + | 12550 - 12807 | 9278.98 |
| sarcosine oxidase subunit beta | SAMN04487947_0012 | Not Available | - | 12844 - 13992 | 40370.7 |
| alanine dehydrogenase | SAMN04487947_0013 | Not Available | + | 14105 - 15073 | 33673.3 |
| tryptophanyl-trna synthetase | SAMN04487947_0014 | Not Available | - | 15080 - 16696 | 59889.7 |
| pp_00015 | SAMN04487947_0015 | Not Available | - | 16693 - 17742 | Not Available |
| hypothetical protein | SAMN04487947_0016 | Not Available | + | 17851 - 18096 | 9452.84 |
| dna topoisomerase-1 | SAMN04487947_0017 | Not Available | - | 18178 - 18918 | 26075.6 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN04487947_0018 | Not Available | + | 18994 - 19644 | 23793.3 |
| replicative superfamily ii helicase | SAMN04487947_0019 | Not Available | - | 19786 - 22137 | 86562.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.