Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription initiation factor iib (tfiib) | SAMN04487947_1887 | Not Available | Positive | 1791458 - 1792411 | 35747.1 |
| tigr03663 family protein | SAMN04487947_1888 | Not Available | Negative | 1792555 - 1794252 | 60069.1 |
| hypothetical protein | SAMN04487947_1889 | Not Available | Positive | 1794344 - 1794697 | 12113.7 |
| nucleotide-binding universal stress protein, uspa family | SAMN04487947_1890 | Not Available | Positive | 1794747 - 1795181 | 15160.6 |
| protein of unknown function | SAMN04487947_1891 | Not Available | Positive | 1795487 - 1797814 | 84163.9 |
| hypothetical protein | SAMN04487947_1892 | Not Available | Positive | 1798004 - 1798438 | 16285.7 |
| ferredoxin | SAMN04487947_1893 | Not Available | Positive | 1798559 - 1798885 | 11523.5 |
| cupin domain-containing protein | SAMN04487947_1894 | Not Available | Negative | 1798953 - 1799594 | 23673.8 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04487947_1895 | Not Available | Negative | 1799591 - 1800745 | 41706.0 |
| heam-based aerotactic trancducer | SAMN04487947_1896 | Not Available | Negative | 1800818 - 1802485 | 59856.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
