Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein ydbs, contains bph2 (pleckstrin homology) domain | SAMN04487947_1857 | Not Available | Negative | 1762486 - 1763037 | 19132.0 |
| ph domain-containing protein | SAMN04487947_1858 | Not Available | Negative | 1763034 - 1763651 | 21892.5 |
| doxx protein | SAMN04487947_1859 | Not Available | Negative | 1763698 - 1764150 | 15520.8 |
| acyl dehydratase | SAMN04487947_1860 | Not Available | Negative | 1764158 - 1764610 | 17039.6 |
| pgf-cterm protein | SAMN04487947_1861 | Not Available | Positive | 1764733 - 1765008 | 9079.66 |
| hypothetical protein | SAMN04487947_1862 | Not Available | Positive | 1765105 - 1766712 | 55597.9 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN04487947_1863 | Not Available | Positive | 1766769 - 1767647 | 31104.0 |
| glutamate dehydrogenase (nad(p)+) | SAMN04487947_1864 | Not Available | Positive | 1767729 - 1768985 | 45879.0 |
| diguanylate cyclase and two-component system sensory domain-containing protein | SAMN04487947_1865 | Not Available | Positive | 1769151 - 1769888 | 27019.9 |
| aspartate carbamoyltransferase | SAMN04487947_1866 | Not Available | Positive | 1770018 - 1770932 | 33733.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
