Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN04487947_1453 | Not Available | Positive | 1352520 - 1353854 | 45663.7 |
| hypothetical protein | SAMN04487947_1454 | Not Available | Negative | 1353918 - 1355006 | 36716.3 |
| xaa-pro aminopeptidase | SAMN04487947_1455 | Not Available | Positive | 1355107 - 1356222 | 39568.7 |
| hypothetical protein | SAMN04487947_1456 | Not Available | Positive | 1356325 - 1356504 | 6272.67 |
| hypothetical protein | SAMN04487947_1457 | Not Available | Negative | 1356528 - 1357637 | 39263.1 |
| acetyltransferase | SAMN04487947_1458 | Not Available | Negative | 1357641 - 1359734 | 73912.9 |
| hypothetical protein | SAMN04487947_1459 | Not Available | Negative | 1359876 - 1360178 | 11206.5 |
| putative, 10tm heavy-metal exporter | SAMN04487947_1460 | Not Available | Negative | 1360220 - 1361434 | 41450.4 |
| cys-trna(pro) deacylase, prolyl-trna editing enzyme ybak/ebsc | SAMN04487947_1461 | Not Available | Negative | 1361543 - 1362064 | 18188.9 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN04487947_1462 | Not Available | Negative | 1362100 - 1362417 | 11232.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
