Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein | SAMN04487947_1261 | Not Available | Positive | 1171372 - 1171599 | 7944.48 |
| presenilin-like membrane protease, a22 family | SAMN04487947_1262 | Not Available | Positive | 1171639 - 1172673 | 34925.5 |
| conserved protein with predicted rna binding pua domain | SAMN04487947_1263 | Not Available | Negative | 1172719 - 1173216 | 17244.8 |
| hypothetical protein | SAMN04487947_1264 | Not Available | Positive | 1173365 - 1173544 | 5741.06 |
| hypothetical protein | SAMN04487947_1265 | Not Available | Positive | 1173614 - 1174585 | 33822.7 |
| uncharacterized conserved protein, laba/duf88 family | SAMN04487947_1266 | Not Available | Negative | 1174604 - 1175101 | 18261.3 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN04487947_1267 | Not Available | Positive | 1175393 - 1176319 | 32307.6 |
| dihydrodipicolinate reductase | SAMN04487947_1268 | Not Available | Positive | 1176320 - 1177090 | 26608.6 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | SAMN04487947_1269 | Not Available | Positive | 1177087 - 1177932 | 30172.2 |
| diaminopimelate decarboxylase | SAMN04487947_1270 | Not Available | Positive | 1177929 - 1179188 | 44586.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
