Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04487947_1101 | Not Available | Positive | 1024495 - 1024974 | 17855.0 |
| hypothetical protein | SAMN04487947_1102 | Not Available | Negative | 1024944 - 1025141 | 6987.74 |
| dna-(apurinic or apyrimidinic site) lyase /endonuclease iii | SAMN04487947_1103 | Not Available | Negative | 1025125 - 1025808 | 25356.4 |
| pas domain s-box-containing protein | SAMN04487947_1104 | Not Available | Positive | 1025976 - 1028831 | 105606.0 |
| hypothetical protein | SAMN04487947_1105 | Not Available | Positive | 1028893 - 1029018 | 4290.46 |
| proteasome regulatory subunit | SAMN04487947_1106 | Not Available | Negative | 1029120 - 1030337 | 45431.3 |
| transcriptional regulator, arsr family | SAMN04487947_1107 | Not Available | Positive | 1030488 - 1030772 | 10763.6 |
| hypothetical protein | SAMN04487947_1108 | Not Available | Positive | 1030798 - 1031235 | 14828.8 |
| dna repair exonuclease sbccd nuclease subunit | SAMN04487947_1109 | Not Available | Positive | 1031232 - 1032698 | 52400.5 |
| exonuclease sbcc | SAMN04487947_1110 | Not Available | Positive | 1032699 - 1035383 | 101047.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
