Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Halobacteria
Order
Halobacteriales
Family
Haloferacaceae
Genus
Halogeometricum
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Halobacteria |
| Order | Halobacteriales |
| Family | Haloferacaceae |
| Genus | Halogeometricum |
| Species | Halogeometricum rufum |
| Strain | strain CGMCC 1.7736 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
677079 bp
Thymine Count
677471 bp
Guanine Count
1416233 bp
Cytosine Count
1416342 bp
Genome Length
4187125 bp
Protein-coding Genes
4155 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | SAMN04487947_1041 | Not Available | Negative | 967807 - 968175 | 12891.8 |
| 3-dehydroquinate synthase ii | SAMN04487947_1042 | Not Available | Positive | 968567 - 969751 | 43182.8 |
| hypothetical protein | SAMN04487947_1043 | Not Available | Negative | 969866 - 970303 | 15654.7 |
| 3-dehydroquinate dehydratase | SAMN04487947_1044 | Not Available | Negative | 970362 - 971048 | 24124.8 |
| transcription initiation factor iib (tfiib) | SAMN04487947_1045 | Not Available | Negative | 971161 - 972126 | 35615.3 |
| iron complex transport system substrate-binding protein | SAMN04487947_1046 | Not Available | Positive | 972437 - 973273 | 29562.8 |
| inosine/xanthosine triphosphatase | SAMN04487947_1047 | Not Available | Positive | 973310 - 973816 | 16984.7 |
| hypothetical protein | SAMN04487947_1048 | Not Available | Negative | 973813 - 975645 | 65557.6 |
| hypothetical protein | SAMN04487947_1049 | Not Available | Positive | 975897 - 976145 | 9001.57 |
| predicted transcriptional regulator, containsd two hth domains | SAMN04487947_1050 | Not Available | Negative | 976284 - 976904 | 22447.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
