Robiginitalea myxolifaciens strain DSM 21019

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Robiginitalea

Description

Robiginitalea myxolifaciens strain DSM 21019 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain possesses true flagella, although it does not exhibit motility. It thrives optimally at a temperature of 29°C and falls within the mesophilic temperature range, which allows it to inhabit environments that are moderately warm. The genomic structure of R. myxolifaciens DSM 21019 features a single replicon, indicating a straightforward genetic organization. This bacterium does not form spores, suggesting a lifestyle that relies on other survival mechanisms in its ecological niche. The absence of motility and sporulation may indicate a specific adaptation to its environment, where it likely relies on other means to interact with its surroundings and other microbial communities. Understanding the physiological traits of R. myxolifaciens could provide insights into its ecological role, particularly in nutrient cycling and interactions within microbial consortia. Such bacteria play significant roles in their ecosystems, potentially contributing to the degradation of organic materials or influencing the composition of microbial populations in their habitats. The accession number for this strain is FOYQ00000000.1, which can be referenced for more detailed genomic information.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusRobiginitalea
SpeciesRobiginitalea myxolifaciens
Strainstrain DSM 21019

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Robiginitalea myxolifaciens strain DSM 21019
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Robiginitalea myxolifaciens strain DSM 21019 genome assembly,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2844 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxoglutarate dehydrogenase e2 componentSAMN04490243_0691Not AvailableNegative784896 - 78613144141.0
2-oxoglutarate dehydrogenase e1 componentSAMN04490243_0692Not AvailableNegative786189 - 789008106631.0
udp-glucose 4-epimeraseSAMN04490243_0693Not AvailableNegative789121 - 79014937571.4
dtdp-4-amino-4,6-dideoxygalactose transaminaseSAMN04490243_0694Not AvailableNegative790189 - 79132541305.3
3-deoxy-d-manno-octulosonic-acid transferaseSAMN04490243_0695Not AvailablePositive791425 - 79268147123.2
hypothetical proteinSAMN04490243_0696Not AvailablePositive792719 - 7929257463.83
mfs transporter, sugar porter (sp) familySAMN04490243_0697Not AvailablePositive792975 - 79433649762.3
por secretion system c-terminal sorting domain-containing proteinSAMN04490243_0698Not AvailablePositive794698 - 79708879311.1
hypothetical proteinSAMN04490243_0699Not AvailablePositive797286 - 7974144376.73
translation factor sua5SAMN04490243_0700Not AvailableNegative797465 - 79843034616.1

Displaying genes 691 – 700 of 2883 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.