Robiginitalea myxolifaciens strain DSM 21019

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Robiginitalea

Description

Robiginitalea myxolifaciens strain DSM 21019 is a Gram-negative, aerobic bacterium characterized by its rod shape and non-motile nature. This strain possesses true flagella, although it does not exhibit motility. It thrives optimally at a temperature of 29°C and falls within the mesophilic temperature range, which allows it to inhabit environments that are moderately warm. The genomic structure of R. myxolifaciens DSM 21019 features a single replicon, indicating a straightforward genetic organization. This bacterium does not form spores, suggesting a lifestyle that relies on other survival mechanisms in its ecological niche. The absence of motility and sporulation may indicate a specific adaptation to its environment, where it likely relies on other means to interact with its surroundings and other microbial communities. Understanding the physiological traits of R. myxolifaciens could provide insights into its ecological role, particularly in nutrient cycling and interactions within microbial consortia. Such bacteria play significant roles in their ecosystems, potentially contributing to the degradation of organic materials or influencing the composition of microbial populations in their habitats. The accession number for this strain is FOYQ00000000.1, which can be referenced for more detailed genomic information.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusRobiginitalea
SpeciesRobiginitalea myxolifaciens
Strainstrain DSM 21019

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Robiginitalea myxolifaciens strain DSM 21019
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Robiginitalea myxolifaciens strain DSM 21019 genome assembly,

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2844 genes

Non-Coding Genes

41 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tryptophan synthase beta chainSAMN04490243_0339Not AvailablePositive393730 - 39492043068.4
tryptophan synthase, alpha chainSAMN04490243_0340Not AvailablePositive394955 - 39572527976.8
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylaseSAMN04490243_0341Not AvailablePositive395750 - 39734858757.8
phosphoenolpyruvate carboxylase, type 1SAMN04490243_0342Not AvailableNegative397384 - 39993097876.6
g:t/u-mismatch repair dna glycosylaseSAMN04490243_0343Not AvailableNegative400109 - 40080126235.8
rps31 30s ribosomal protein s31SAMN04490243_0344Not AvailablePositive400873 - 4010014798.03
hypothetical proteinSAMN04490243_0345Not AvailableNegative401042 - 40180329325.4
ribosomal large subunit pseudouridine synthase dSAMN04490243_0346Not AvailableNegative401913 - 40295639634.1
pasta domain-containing proteinSAMN04490243_0347Not AvailableNegative402956 - 40354621938.4
d-alanine-d-alanine ligaseSAMN04490243_0348Not AvailablePositive403640 - 40462636152.0

Displaying genes 341 – 350 of 2883 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.