Halorubrum sodomense strain RD 26

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sodomense strain RD 26 is a halophilic archaeon characterized by its rod-shaped morphology and the presence of flagella, which facilitate motility in hypersaline environments. Its genomic structure comprises a single replicon, indicating a streamlined genetic organization that is often advantageous for survival in extreme conditions typical of its habitat. The strain is cataloged under the accession number FOYN00000000.1, which provides a reference for genetic and genomic studies. As a member of the Halobacteriaceae family, Halorubrum sodomense exhibits adaptations to high-salinity environments, which are critical for its survival and growth. The presence of flagella likely plays a significant role in the organism's ability to navigate its saline surroundings, potentially aiding in the search for nutrients and optimal conditions for growth. Understanding the motility mechanisms in such extremophiles can offer insights into their ecological roles, such as their interactions with other microbial communities in saline ecosystems. Overall, Halorubrum sodomense strain RD 26 serves as an interesting model for studying adaptations to extreme environments, contributing to our understanding of microbial life in hypersaline ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sodomense
Strainstrain RD 26

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sodomense strain RD 26 genome assembly, contig:

Gene Summary

Adenine Count

467718 bp

Thymine Count

471022 bp

Guanine Count

1037690 bp

Cytosine Count

1054093 bp

Genome Length

3030553 bp

Protein-coding Genes

2980 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
large subunit ribosomal protein l18eSAMN04487937_0978Not AvailableNegative932034 - 93238712805.0
Trna-leuNot AvailableNot AvailablePositive932427 - 932511Not Available
dna-directed rna polymerase subunit dSAMN04487937_0980Not AvailableNegative932661 - 93341327529.1
small subunit ribosomal protein s11SAMN04487937_0981Not AvailableNegative933415 - 93380413555.0
small subunit ribosomal protein s4SAMN04487937_0982Not AvailableNegative933804 - 93433719841.9
small subunit ribosomal protein s13SAMN04487937_0983Not AvailableNegative934334 - 93485519518.2
Trna-serNot AvailableNot AvailablePositive934912 - 934997Not Available
alcohol dehydrogenase groes-like domain-containing proteinSAMN04487937_0985Not AvailablePositive935836 - 93687636807.1
hypothetical proteinSAMN04487937_0986Not AvailablePositive936866 - 93723112266.2
cytidylate kinaseSAMN04487937_0987Not AvailablePositive937320 - 93789821750.0

Displaying genes 971 – 980 of 3044 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.