Halorubrum sodomense strain RD 26

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sodomense strain RD 26 is a halophilic archaeon characterized by its rod-shaped morphology and the presence of flagella, which facilitate motility in hypersaline environments. Its genomic structure comprises a single replicon, indicating a streamlined genetic organization that is often advantageous for survival in extreme conditions typical of its habitat. The strain is cataloged under the accession number FOYN00000000.1, which provides a reference for genetic and genomic studies. As a member of the Halobacteriaceae family, Halorubrum sodomense exhibits adaptations to high-salinity environments, which are critical for its survival and growth. The presence of flagella likely plays a significant role in the organism's ability to navigate its saline surroundings, potentially aiding in the search for nutrients and optimal conditions for growth. Understanding the motility mechanisms in such extremophiles can offer insights into their ecological roles, such as their interactions with other microbial communities in saline ecosystems. Overall, Halorubrum sodomense strain RD 26 serves as an interesting model for studying adaptations to extreme environments, contributing to our understanding of microbial life in hypersaline ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sodomense
Strainstrain RD 26

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sodomense strain RD 26 genome assembly, contig:

Gene Summary

Adenine Count

467718 bp

Thymine Count

471022 bp

Guanine Count

1037690 bp

Cytosine Count

1054093 bp

Genome Length

3030553 bp

Protein-coding Genes

2980 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
6-phosphogluconate dehydrogenaseSAMN04487937_0928Not AvailableNegative885499 - 88642232734.8
threonine synthaseSAMN04487937_0929Not AvailableNegative886476 - 88770842653.3
predicted dna binding protein, contains hth domainSAMN04487937_0930Not AvailablePositive887881 - 88871729589.0
glycine dehydrogenase subunit 2SAMN04487937_0931Not AvailableNegative888749 - 89017950952.2
glycine dehydrogenase subunit 1SAMN04487937_0932Not AvailableNegative890180 - 89150847199.0
glycine cleavage system h proteinSAMN04487937_0933Not AvailableNegative891699 - 89208213713.5
flap endonuclease 1SAMN04487937_0934Not AvailableNegative892348 - 89332535446.2
ferredoxinSAMN04487937_0935Not AvailablePositive893490 - 89415224391.9
thiosulfate dehydrogenaseSAMN04487937_0936Not AvailableNegative894210 - 89479121169.2
recj-like exonuclease, contains dnaj-type zn finger domainSAMN04487937_0937Not AvailableNegative894965 - 89715777523.8

Displaying genes 921 – 930 of 3044 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.