Halorubrum sodomense strain RD 26

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sodomense strain RD 26 is a halophilic archaeon characterized by its rod-shaped morphology and the presence of flagella, which facilitate motility in hypersaline environments. Its genomic structure comprises a single replicon, indicating a streamlined genetic organization that is often advantageous for survival in extreme conditions typical of its habitat. The strain is cataloged under the accession number FOYN00000000.1, which provides a reference for genetic and genomic studies. As a member of the Halobacteriaceae family, Halorubrum sodomense exhibits adaptations to high-salinity environments, which are critical for its survival and growth. The presence of flagella likely plays a significant role in the organism's ability to navigate its saline surroundings, potentially aiding in the search for nutrients and optimal conditions for growth. Understanding the motility mechanisms in such extremophiles can offer insights into their ecological roles, such as their interactions with other microbial communities in saline ecosystems. Overall, Halorubrum sodomense strain RD 26 serves as an interesting model for studying adaptations to extreme environments, contributing to our understanding of microbial life in hypersaline ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sodomense
Strainstrain RD 26

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sodomense strain RD 26 genome assembly, contig:

Gene Summary

Adenine Count

467718 bp

Thymine Count

471022 bp

Guanine Count

1037690 bp

Cytosine Count

1054093 bp

Genome Length

3030553 bp

Protein-coding Genes

2980 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN04487937_0543Not AvailableNegative519118 - 51995430747.8
putative nucleotide binding proteinSAMN04487937_0544Not AvailablePositive520057 - 52064421658.2
16s rrna (adenine1518-n6/adenine1519-n6)-dimethyltransferaseSAMN04487937_0545Not AvailablePositive520742 - 52165332462.8
small-conductance mechanosensitive channelSAMN04487937_0546Not AvailablePositive521656 - 52283441520.5
release factor glutamine methyltransferaseSAMN04487937_0547Not AvailablePositive522831 - 52344821844.2
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferaseSAMN04487937_0548Not AvailablePositive523526 - 52454236501.8
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferaseSAMN04487937_0549Not AvailablePositive524542 - 52561540211.5
sugar phosphate isomerase/epimeraseSAMN04487937_0550Not AvailablePositive525675 - 52642427127.5
hypothetical proteinSAMN04487937_0551Not AvailableNegative526431 - 52724629391.8
predicted acetyltransferaseSAMN04487937_0552Not AvailableNegative527322 - 52858747410.2

Displaying genes 541 – 550 of 3044 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.