Halorubrum sodomense strain RD 26

Rod

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Halobacteria

Order

Halobacteriales

Family

Haloferacaceae

Genus

Halorubrum

Description

Halorubrum sodomense strain RD 26 is a halophilic archaeon characterized by its rod-shaped morphology and the presence of flagella, which facilitate motility in hypersaline environments. Its genomic structure comprises a single replicon, indicating a streamlined genetic organization that is often advantageous for survival in extreme conditions typical of its habitat. The strain is cataloged under the accession number FOYN00000000.1, which provides a reference for genetic and genomic studies. As a member of the Halobacteriaceae family, Halorubrum sodomense exhibits adaptations to high-salinity environments, which are critical for its survival and growth. The presence of flagella likely plays a significant role in the organism's ability to navigate its saline surroundings, potentially aiding in the search for nutrients and optimal conditions for growth. Understanding the motility mechanisms in such extremophiles can offer insights into their ecological roles, such as their interactions with other microbial communities in saline ecosystems. Overall, Halorubrum sodomense strain RD 26 serves as an interesting model for studying adaptations to extreme environments, contributing to our understanding of microbial life in hypersaline ecosystems.

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassHalobacteria
OrderHalobacteriales
FamilyHaloferacaceae
GenusHalorubrum
SpeciesHalorubrum sodomense
Strainstrain RD 26

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halorubrum sodomense strain RD 26 genome assembly, contig:

Gene Summary

Adenine Count

467718 bp

Thymine Count

471022 bp

Guanine Count

1037690 bp

Cytosine Count

1054093 bp

Genome Length

3030553 bp

Protein-coding Genes

2980 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-dehydro-3-deoxygluconokinaseSAMN04487937_0229Not AvailableNegative220838 - 22179434102.5
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN04487937_0230Not AvailableNegative222028 - 22287929457.1
galactonate dehydrataseSAMN04487937_0231Not AvailableNegative222971 - 22412242127.4
2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolaseSAMN04487937_0232Not AvailablePositive224330 - 22496821086.6
hypothetical proteinSAMN04487937_0233Not AvailableNegative225048 - 2252035625.42
phenylalanyl-trna synthetase beta subunitSAMN04487937_0234Not AvailableNegative225329 - 22711065292.4
phenylalanyl-trna synthetase, alpha subunitSAMN04487937_0235Not AvailableNegative227110 - 22864555686.3
hypothetical proteinSAMN04487937_0236Not AvailablePositive228769 - 22907410209.8
hypothetical proteinSAMN04487937_0237Not AvailableNegative229112 - 22981324254.6
septum site-determining protein mindSAMN04487937_0238Not AvailableNegative229929 - 23057921719.1

Displaying genes 231 – 240 of 3044 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.