Parafilimonas terrae strain DSM 28286

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Parafilimonas

Description

Parafilimonas terrae strain DSM 28286 is characterized by having a single replicon, which is indicative of its genomic structure. The strain is cataloged with the accession number FOXQ00000000.1, providing a reference point for further studies and genetic comparisons. This bacterium is part of the genus Parafilimonas, which is known for its unique ecological niche. The presence of only one replicon suggests a streamlined genetic organization, which may contribute to its adaptability and efficiency in its environment. Understanding the genomic characteristics of Parafilimonas terrae can offer insights into its metabolic capabilities and potential roles in its ecosystem. The streamlined genome may allow Parafilimonas terrae to efficiently utilize available resources in its habitat, potentially influencing nutrient cycling or other ecological interactions. Further investigation into its ecological role could reveal its significance in soil microbiomes or other environments where it may reside. Overall, the genomic traits of Parafilimonas terrae strain DSM 28286 indicate a well-adapted organism that could play a vital role in its ecological context.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusParafilimonas
SpeciesParafilimonas terrae
Strainstrain DSM 28286

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parafilimonas terrae strain DSM 28286


Gene Summary

Adenine Count

1514810 bp

Thymine Count

1497237 bp

Guanine Count

974149 bp

Cytosine Count

999214 bp

Genome Length

4985410 bp

Protein-coding Genes

4255 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
demethylmenaquinone methyltransferaseSAMN05444277_1011Not AvailableNegative284 - 81119690.8
protein of unknown functionSAMN05444277_1012Not AvailableNegative1149 - 6224196660.0
hypothetical proteinSAMN05444277_1013Not AvailableNegative6242 - 666715946.0
fic/doc family proteinSAMN05444277_1014Not AvailableNegative6797 - 738722465.8
rep element-mobilizing transposase raytSAMN05444277_1015Not AvailablePositive7519 - 801019485.5
Trna-serNot AvailableNot AvailablePositive8414 - 8502Not Available
hydroxypyruvate isomeraseSAMN05444277_1017Not AvailableNegative8658 - 957533787.5
protein n-acetyltransferase, rimj/riml familySAMN05444277_1018Not AvailableNegative9707 - 1027621649.6
predicted dehydrogenaseSAMN05444277_1019Not AvailableNegative10277 - 1160849510.8
formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domainSAMN05444277_10110Not AvailableNegative11619 - 1256635569.0

Displaying genes 1 – 10 of 4301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.