Parafilimonas terrae strain DSM 28286

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Parafilimonas

Description

Parafilimonas terrae strain DSM 28286 is characterized by having a single replicon, which is indicative of its genomic structure. The strain is cataloged with the accession number FOXQ00000000.1, providing a reference point for further studies and genetic comparisons. This bacterium is part of the genus Parafilimonas, which is known for its unique ecological niche. The presence of only one replicon suggests a streamlined genetic organization, which may contribute to its adaptability and efficiency in its environment. Understanding the genomic characteristics of Parafilimonas terrae can offer insights into its metabolic capabilities and potential roles in its ecosystem. The streamlined genome may allow Parafilimonas terrae to efficiently utilize available resources in its habitat, potentially influencing nutrient cycling or other ecological interactions. Further investigation into its ecological role could reveal its significance in soil microbiomes or other environments where it may reside. Overall, the genomic traits of Parafilimonas terrae strain DSM 28286 indicate a well-adapted organism that could play a vital role in its ecological context.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusParafilimonas
SpeciesParafilimonas terrae
Strainstrain DSM 28286

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Parafilimonas terrae strain DSM 28286 genome assembly, contig:

Gene Summary

Adenine Count

1514810 bp

Thymine Count

1497237 bp

Guanine Count

974149 bp

Cytosine Count

999214 bp

Genome Length

4985410 bp

Protein-coding Genes

4255 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transporter family-2 proteinSAMN05444277_10262Not AvailablePositive1178426 - 117886915337.7
inosose dehydrataseSAMN05444277_10263Not AvailablePositive1178965 - 117990935343.6
malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenaseSAMN05444277_10264Not AvailablePositive1179959 - 118147054954.4
kynurenine formamidaseSAMN05444277_10265Not AvailablePositive1181554 - 118234529886.7
l-iditol 2-dehydrogenaseSAMN05444277_10266Not AvailablePositive1182366 - 118344838933.0
dihydroanticapsin dehydrogenaseSAMN05444277_10267Not AvailablePositive1183482 - 118423727083.4
transketolaseSAMN05444277_10268Not AvailablePositive1184268 - 118635876469.8
mannose-6-phosphate isomerase, cupin superfamilySAMN05444277_10269Not AvailablePositive1186355 - 118673514029.8
tonb-linked outer membrane protein, susc/raga familySAMN05444277_10270Not AvailablePositive1186991 - 1190017109603.0
starch-binding associating with outer membraneSAMN05444277_10271Not AvailablePositive1190078 - 119158656460.4

Displaying genes 1031 – 1040 of 4301 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.