Pseudomonas sagittaria strain JCM 18195

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Geopseudomonas

Description

Pseudomonas sagittaria strain JCM 18195 is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This strain is classified as mesophilic, with an optimal growth temperature of 29°C, indicating its preference for moderate temperature ranges typically found in various environmental niches. The strain possesses a single replicon, which is a notable genetic feature that can influence its replication and stability within its ecological context. The genomic data for Pseudomonas sagittaria strain JCM 18195 is available under the accession number FOXM00000000.1, providing a resource for further genetic and functional studies. Pseudomonas species are known for their metabolic versatility and ecological adaptability, often playing critical roles in nutrient cycling and biodegradation in diverse environments. The aerobic nature of strain JCM 18195 suggests its involvement in processes that require oxygen, such as the degradation of organic compounds. This trait can be particularly significant in soil and aquatic ecosystems, where the presence of oxygen influences microbial community dynamics and nutrient availability. In summary, Pseudomonas sagittaria strain JCM 18195 exemplifies the characteristics of aerobic, mesophilic bacteria with potential ecological significance in organic matter decomposition and nutrient cycling within its habitat. Its genetic information can further enhance our understanding of its functional roles in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusGeopseudomonas
SpeciesGeopseudomonas sagittaria
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sagittaria strain JCM 18195 genome assembly, contig:

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4105 genes

Non-Coding Genes

167 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s rrna (adenine2503-c2)-methyltransferaseSAMN05216229_108108Not AvailablePositive2589787 - 259082437983.1
protein of unknown function vcgc/vcgeSAMN05216229_108109Not AvailableNegative2590790 - 259168327523.3
xanthine phosphoribosyltransferaseSAMN05216229_108110Not AvailablePositive2591878 - 259245020410.9
cytochrome c5SAMN05216229_108111Not AvailableNegative2592514 - 259293613636.5
helix-turn-helixSAMN05216229_108112Not AvailableNegative2593221 - 259376920024.9
alanine racemaseSAMN05216229_108113Not AvailableNegative2593882 - 259497339314.5
enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 familySAMN05216229_108114Not AvailableNegative2595034 - 259538412800.3
d-amino-acid dehydrogenaseSAMN05216229_108115Not AvailableNegative2595359 - 259665747319.9
lrp/asnc family transcriptional regulator, leucine-responsive regulatory proteinSAMN05216229_108116Not AvailablePositive2596810 - 259729818830.9
alanine or glycine:cation symporter, agcs familySAMN05216229_108117Not AvailableNegative2597394 - 259876447503.9

Displaying genes 2401 – 2410 of 4270 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.