Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Ectopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Ectopseudomonas |
| Species | Ectopseudomonas toyotomiensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | rhizosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1027368 bp
Thymine Count
1025243 bp
Guanine Count
1717380 bp
Cytosine Count
1719813 bp
Genome Length
5489814 bp
Protein-coding Genes
5018 genes
Non-Coding Genes
206 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant) | SAMN05216177_11165 | Not Available | Positive | 4462355 - 4463518 | 43779.1 |
| planctomycete cytochrome c | SAMN05216177_11166 | Not Available | Positive | 4463674 - 4464576 | 32075.8 |
| protein sco1/2 | SAMN05216177_11167 | Not Available | Negative | 4464562 - 4465224 | 24301.0 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05216177_11168 | Not Available | Negative | 4465243 - 4467048 | 67267.0 |
| dgtpase | SAMN05216177_11169 | Not Available | Positive | 4467609 - 4468940 | 49929.7 |
| fusaric acid resistance protein-like | SAMN05216177_11170 | Not Available | Positive | 4468953 - 4470017 | 38088.0 |
| hd-gyp domain, c-di-gmp phosphodiesterase class ii (or its inactivated variant) | SAMN05216177_11171 | Not Available | Positive | 4470088 - 4473039 | 109861.0 |
| hypothetical protein | SAMN05216177_11172 | Not Available | Negative | 4473143 - 4473484 | 12872.0 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN05216177_11173 | Not Available | Positive | 4473733 - 4475169 | 52323.4 |
| 23s rrna m(2)g-2445 methyltransferase | SAMN05216177_11174 | Not Available | Negative | 4475244 - 4477424 | 81586.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

