Oscillibacter sp. PC13

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Oscillibacter

Description

Oscillibacter sp. PC13 is a rod-shaped bacterium notable for its motility, attributed to the presence of flagella. This feature allows the organism to navigate its environment, which may be significant for its ecological interactions and survival strategies. The bacterium is characterized by having a single replicon, indicating a streamlined genomic structure, which may influence its replication and metabolic processes. The genomic information for Oscillibacter sp. PC13 is available under the accession number FOXE00000000.1, providing a resource for further scientific investigation into its genetic makeup and potential applications. In terms of ecological significance, the motility of Oscillibacter sp. PC13 may facilitate its colonization of specific niches within various environments, potentially influencing microbial community dynamics. Understanding the ecological role of this bacterium could provide insights into its interactions with other microorganisms and its contributions to nutrient cycling. Thus, the traits of Oscillibacter sp. PC13 not only define its biological characteristics but also hint at its ecological potential within microbial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusOscillibacter
SpeciesOscillibacter sp. PC13
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oscillibacter sp. PC13 genome assembly, contig: Ga0066884_142,

Gene Summary

Adenine Count

638674 bp

Thymine Count

630364 bp

Guanine Count

770231 bp

Cytosine Count

753729 bp

Genome Length

2792998 bp

Protein-coding Genes

2706 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, iclr familySAMN05216343_13013Not AvailablePositive2742700 - 274351830689.8
iron only hydrogenase large subunit, c-terminal domainSAMN05216343_13014Not AvailableNegative2743592 - 274419721781.3
protein of unknown functionSAMN05216343_1311Not AvailableNegative2744198 - 274495530124.5
tpr repeatSAMN05216343_1312Not AvailableNegative2745157 - 274622741210.7
2-keto-3-deoxygluconate aldolaseSAMN05216343_1313Not AvailablePositive2746907 - 274791437249.0
tripartite-type tricarboxylate transporter, receptor component tctcSAMN05216343_1314Not AvailablePositive2748152 - 274928840635.8
tripartite tricarboxylate transporter tctb family proteinSAMN05216343_1315Not AvailablePositive2749380 - 274985017457.9
putative tricarboxylic transport membrane proteinSAMN05216343_1316Not AvailablePositive2749863 - 275138653134.5
malate/lactate/ureidoglycolate dehydrogenase, ldh2 familySAMN05216343_1317Not AvailablePositive2751546 - 275255936169.6
protein of unknown functionSAMN05216343_1318Not AvailablePositive2752723 - 275383540073.9

Displaying genes 2721 – 2730 of 2774 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.