Oscillibacter sp. PC13

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Oscillibacter

Description

Oscillibacter sp. PC13 is a rod-shaped bacterium notable for its motility, attributed to the presence of flagella. This feature allows the organism to navigate its environment, which may be significant for its ecological interactions and survival strategies. The bacterium is characterized by having a single replicon, indicating a streamlined genomic structure, which may influence its replication and metabolic processes. The genomic information for Oscillibacter sp. PC13 is available under the accession number FOXE00000000.1, providing a resource for further scientific investigation into its genetic makeup and potential applications. In terms of ecological significance, the motility of Oscillibacter sp. PC13 may facilitate its colonization of specific niches within various environments, potentially influencing microbial community dynamics. Understanding the ecological role of this bacterium could provide insights into its interactions with other microorganisms and its contributions to nutrient cycling. Thus, the traits of Oscillibacter sp. PC13 not only define its biological characteristics but also hint at its ecological potential within microbial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusOscillibacter
SpeciesOscillibacter sp. PC13
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oscillibacter sp. PC13 genome assembly, contig: Ga0066884_142,

Gene Summary

Adenine Count

638674 bp

Thymine Count

630364 bp

Guanine Count

770231 bp

Cytosine Count

753729 bp

Genome Length

2792998 bp

Protein-coding Genes

2706 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
simple sugar transport system atp-binding proteinSAMN05216343_1249Not AvailablePositive2579903 - 258140855512.4
nucleoside abc transporter membrane proteinSAMN05216343_12410Not AvailablePositive2581405 - 258244836466.2
nucleoside abc transporter membrane proteinSAMN05216343_12411Not AvailablePositive2582452 - 258338432675.0
nucleoside-binding proteinSAMN05216343_12412Not AvailablePositive2583429 - 258447536853.0
cytidine and deoxycytidylate deaminase zinc-binding regionSAMN05216343_12413Not AvailablePositive2584499 - 258497817416.7
adenosine deaminaseSAMN05216343_12414Not AvailableNegative2585036 - 258604937393.4
Trna-serNot AvailableNot AvailablePositive2586214 - 2586305Not Available
putative zinc-fingerSAMN05216343_12416Not AvailableNegative2586541 - 258750933562.3
rna polymerase, sigma-24 subunit, rpoeSAMN05216343_12417Not AvailableNegative2587506 - 258812923684.8
pp_02513SAMN05216343_12418Not AvailableNegative2588126 - 2589094Not Available

Displaying genes 2561 – 2570 of 2774 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.