Oscillibacter sp. PC13

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Oscillibacter

Description

Oscillibacter sp. PC13 is a rod-shaped bacterium notable for its motility, attributed to the presence of flagella. This feature allows the organism to navigate its environment, which may be significant for its ecological interactions and survival strategies. The bacterium is characterized by having a single replicon, indicating a streamlined genomic structure, which may influence its replication and metabolic processes. The genomic information for Oscillibacter sp. PC13 is available under the accession number FOXE00000000.1, providing a resource for further scientific investigation into its genetic makeup and potential applications. In terms of ecological significance, the motility of Oscillibacter sp. PC13 may facilitate its colonization of specific niches within various environments, potentially influencing microbial community dynamics. Understanding the ecological role of this bacterium could provide insights into its interactions with other microorganisms and its contributions to nutrient cycling. Thus, the traits of Oscillibacter sp. PC13 not only define its biological characteristics but also hint at its ecological potential within microbial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusOscillibacter
SpeciesOscillibacter sp. PC13
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oscillibacter sp. PC13 genome assembly, contig: Ga0066884_142,

Gene Summary

Adenine Count

638674 bp

Thymine Count

630364 bp

Guanine Count

770231 bp

Cytosine Count

753729 bp

Genome Length

2792998 bp

Protein-coding Genes

2706 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amidophosphoribosyltransferaseSAMN05216343_12017Not AvailableNegative2375612 - 237712354850.3
phosphoribosylaminoimidazole-succinocarboxamide synthaseSAMN05216343_12018Not AvailableNegative2377110 - 237782927087.5
5-(carboxyamino)imidazole ribonucleotide mutaseSAMN05216343_12019Not AvailableNegative2377884 - 237837516339.0
gntr family transcriptional regulatorSAMN05216343_12020Not AvailableNegative2378394 - 237911927098.8
lactate dehydrogenaseSAMN05216343_12021Not AvailablePositive2379248 - 238037541108.1
shikimate kinaseSAMN05216343_12022Not AvailablePositive2380362 - 238089218994.1
ribosomal protein s18 acetylase rimiSAMN05216343_12023Not AvailableNegative2380944 - 238140516910.4
dna-binding transcriptional regulator, merr familySAMN05216343_12024Not AvailablePositive2381533 - 238226728834.3
thioredoxin reductase (nadph)SAMN05216343_12025Not AvailableNegative2382316 - 238322731626.8
ribonucleoside-triphosphate reductase class iii catalytic subunitSAMN05216343_12026Not AvailableNegative2383295 - 238568589728.1

Displaying genes 2351 – 2360 of 2774 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.