Oscillibacter sp. PC13

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Oscillibacter

Description

Oscillibacter sp. PC13 is a rod-shaped bacterium notable for its motility, attributed to the presence of flagella. This feature allows the organism to navigate its environment, which may be significant for its ecological interactions and survival strategies. The bacterium is characterized by having a single replicon, indicating a streamlined genomic structure, which may influence its replication and metabolic processes. The genomic information for Oscillibacter sp. PC13 is available under the accession number FOXE00000000.1, providing a resource for further scientific investigation into its genetic makeup and potential applications. In terms of ecological significance, the motility of Oscillibacter sp. PC13 may facilitate its colonization of specific niches within various environments, potentially influencing microbial community dynamics. Understanding the ecological role of this bacterium could provide insights into its interactions with other microorganisms and its contributions to nutrient cycling. Thus, the traits of Oscillibacter sp. PC13 not only define its biological characteristics but also hint at its ecological potential within microbial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusOscillibacter
SpeciesOscillibacter sp. PC13
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oscillibacter sp. PC13 genome assembly, contig: Ga0066884_142,

Gene Summary

Adenine Count

638674 bp

Thymine Count

630364 bp

Guanine Count

770231 bp

Cytosine Count

753729 bp

Genome Length

2792998 bp

Protein-coding Genes

2706 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-dehydroquinate dehydrataseSAMN05216343_11823Not AvailablePositive2239197 - 223962815658.6
carbon starvation proteinSAMN05216343_11824Not AvailableNegative2239730 - 224143960299.3
hypothetical proteinSAMN05216343_11825Not AvailableNegative2241456 - 224197420053.8
transcriptional regulator, gntr familySAMN05216343_11826Not AvailableNegative2242269 - 224295226089.6
part of aaa domain-containing proteinSAMN05216343_11827Not AvailablePositive2243161 - 224384124375.5
2-oxoglutarate ferredoxin oxidoreductase subunit deltaSAMN05216343_11828Not AvailablePositive2243878 - 22440907671.49
2-oxoglutarate ferredoxin oxidoreductase subunit alphaSAMN05216343_11829Not AvailablePositive2244109 - 224517938806.4
2-oxoglutarate ferredoxin oxidoreductase subunit betaSAMN05216343_11830Not AvailablePositive2245181 - 224593927333.2
2-oxoglutarate ferredoxin oxidoreductase subunit gammaSAMN05216343_11831Not AvailablePositive2245941 - 224647718771.8
branched-chain amino acid aminotransferaseSAMN05216343_11833Not AvailablePositive2246914 - 224799039720.9

Displaying genes 2221 – 2230 of 2774 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.