Oscillibacter sp. PC13

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Oscillibacter

Description

Oscillibacter sp. PC13 is a rod-shaped bacterium notable for its motility, attributed to the presence of flagella. This feature allows the organism to navigate its environment, which may be significant for its ecological interactions and survival strategies. The bacterium is characterized by having a single replicon, indicating a streamlined genomic structure, which may influence its replication and metabolic processes. The genomic information for Oscillibacter sp. PC13 is available under the accession number FOXE00000000.1, providing a resource for further scientific investigation into its genetic makeup and potential applications. In terms of ecological significance, the motility of Oscillibacter sp. PC13 may facilitate its colonization of specific niches within various environments, potentially influencing microbial community dynamics. Understanding the ecological role of this bacterium could provide insights into its interactions with other microorganisms and its contributions to nutrient cycling. Thus, the traits of Oscillibacter sp. PC13 not only define its biological characteristics but also hint at its ecological potential within microbial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusOscillibacter
SpeciesOscillibacter sp. PC13
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oscillibacter sp. PC13 genome assembly, contig: Ga0066884_142,

Gene Summary

Adenine Count

638674 bp

Thymine Count

630364 bp

Guanine Count

770231 bp

Cytosine Count

753729 bp

Genome Length

2792998 bp

Protein-coding Genes

2706 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ornithine carbamoyltransferaseSAMN05216343_11153Not AvailablePositive1649552 - 165055037146.6
uncharacterized membrane protein yfcc, ion transporter superfamilySAMN05216343_11154Not AvailablePositive1650564 - 165195248776.2
hypothetical proteinSAMN05216343_11155Not AvailablePositive1652156 - 165357152342.0
xylulokinaseSAMN05216343_11156Not AvailablePositive1653615 - 165516257505.8
pocr sensory domain-containing proteinSAMN05216343_11157Not AvailablePositive1655248 - 165642343995.2
dihydrolipoamide dehydrogenaseSAMN05216343_11158Not AvailableNegative1656568 - 165795948363.5
pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase)SAMN05216343_11159Not AvailableNegative1657978 - 165926446011.6
pyruvate dehydrogenase e1 component beta subunitSAMN05216343_11160Not AvailableNegative1659288 - 166026235666.6
pyruvate dehydrogenase e1 component alpha subunitSAMN05216343_11161Not AvailableNegative1660281 - 166127635856.7
dna-binding transcriptional regulator lsrr, deor familySAMN05216343_11162Not AvailablePositive1661534 - 166250836520.1

Displaying genes 1641 – 1650 of 2774 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.