Oscillibacter sp. PC13

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Oscillibacter

Description

Oscillibacter sp. PC13 is a rod-shaped bacterium notable for its motility, attributed to the presence of flagella. This feature allows the organism to navigate its environment, which may be significant for its ecological interactions and survival strategies. The bacterium is characterized by having a single replicon, indicating a streamlined genomic structure, which may influence its replication and metabolic processes. The genomic information for Oscillibacter sp. PC13 is available under the accession number FOXE00000000.1, providing a resource for further scientific investigation into its genetic makeup and potential applications. In terms of ecological significance, the motility of Oscillibacter sp. PC13 may facilitate its colonization of specific niches within various environments, potentially influencing microbial community dynamics. Understanding the ecological role of this bacterium could provide insights into its interactions with other microorganisms and its contributions to nutrient cycling. Thus, the traits of Oscillibacter sp. PC13 not only define its biological characteristics but also hint at its ecological potential within microbial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusOscillibacter
SpeciesOscillibacter sp. PC13
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oscillibacter sp. PC13 genome assembly, contig: Ga0066884_142,

Gene Summary

Adenine Count

638674 bp

Thymine Count

630364 bp

Guanine Count

770231 bp

Cytosine Count

753729 bp

Genome Length

2792998 bp

Protein-coding Genes

2706 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pdz domain-containing proteinSAMN05216343_11089Not AvailablePositive1578817 - 158015147673.7
hypothetical proteinSAMN05216343_11090Not AvailableNegative1580188 - 158055912990.4
hypothetical proteinSAMN05216343_11091Not AvailableNegative1580556 - 158083110139.9
protein of unknown functionSAMN05216343_11092Not AvailableNegative1580996 - 15811876867.0
regulatory protein, gntr familySAMN05216343_11093Not AvailablePositive1581435 - 158179413864.9
hypothetical proteinSAMN05216343_11094Not AvailablePositive1581897 - 15820766429.64
tripartite atp-independent transporter solute receptor, dctp familySAMN05216343_11095Not AvailablePositive1582255 - 158331338913.5
trap-type c4-dicarboxylate transport system, small permease componentSAMN05216343_11096Not AvailablePositive1583431 - 158400021510.0
trap transporter, dctm subunitSAMN05216343_11097Not AvailablePositive1583997 - 158528345138.6
microcystin degradation protein mlrc, contains duf1485 domainSAMN05216343_11098Not AvailablePositive1585330 - 158682054789.8

Displaying genes 1571 – 1580 of 2774 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.