Oscillibacter sp. PC13

rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Oscillibacter

Description

Oscillibacter sp. PC13 is a rod-shaped bacterium notable for its motility, attributed to the presence of flagella. This feature allows the organism to navigate its environment, which may be significant for its ecological interactions and survival strategies. The bacterium is characterized by having a single replicon, indicating a streamlined genomic structure, which may influence its replication and metabolic processes. The genomic information for Oscillibacter sp. PC13 is available under the accession number FOXE00000000.1, providing a resource for further scientific investigation into its genetic makeup and potential applications. In terms of ecological significance, the motility of Oscillibacter sp. PC13 may facilitate its colonization of specific niches within various environments, potentially influencing microbial community dynamics. Understanding the ecological role of this bacterium could provide insights into its interactions with other microorganisms and its contributions to nutrient cycling. Thus, the traits of Oscillibacter sp. PC13 not only define its biological characteristics but also hint at its ecological potential within microbial ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusOscillibacter
SpeciesOscillibacter sp. PC13
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Oscillibacter sp. PC13 genome assembly, contig: Ga0066884_142,

Gene Summary

Adenine Count

638674 bp

Thymine Count

630364 bp

Guanine Count

770231 bp

Cytosine Count

753729 bp

Genome Length

2792998 bp

Protein-coding Genes

2706 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
small subunit ribosomal protein s9SAMN05216343_11079Not AvailableNegative1570757 - 157116114677.9
lsu ribosomal protein l13pSAMN05216343_11080Not AvailableNegative1571176 - 157160715874.4
inhibitor of the pro-sigma k processing machinerySAMN05216343_11081Not AvailableNegative1571857 - 15721209399.23
protein of unknown functionSAMN05216343_11082Not AvailableNegative1572111 - 15723779811.63
trna(adenine34) deaminaseSAMN05216343_11083Not AvailablePositive1572456 - 157292016667.0
hypothetical proteinSAMN05216343_11084Not AvailableNegative1573147 - 157394728543.3
stage ii sporulation protein dSAMN05216343_11085Not AvailablePositive1574206 - 157522836532.9
hypothetical proteinSAMN05216343_11086Not AvailablePositive1575298 - 157645842310.4
dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domainSAMN05216343_11087Not AvailablePositive1576550 - 157725426888.5
signal transduction histidine kinaseSAMN05216343_11088Not AvailablePositive1577373 - 157880953316.9

Displaying genes 1561 – 1570 of 2774 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.