Pseudomonas borbori strain DSM 17834

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas borbori strain DSM 17834 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain thrives optimally at a temperature of 25°C, indicating its classification as mesophilic, as it grows well within a moderate temperature range. Notably, Pseudomonas borbori is non-spore-forming, which means it does not produce spores as a means of survival under adverse conditions. The strain possesses a single replicon, contributing to its genetic stability and cellular replication processes. The genomic data for Pseudomonas borbori is accessible under the accession number FOWX00000000.1, which allows for further research and exploration of its genetic characteristics and potential applications. In terms of ecological significance, members of the Pseudomonas genus are often known for their versatility in various environments, including soil and water. They play a crucial role in biogeochemical cycles, particularly in the degradation of organic pollutants. Understanding the traits of Pseudomonas borbori strain DSM 17834 can aid in comprehending its ecological role and potential use in bioremediation efforts, where its aerobic metabolism might be leveraged to break down environmental contaminants effectively.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas borbori
Strainstrain DSM 17834

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas borbori strain DSM 17834
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas borbori strain DSM 17834 genome assembly, contig:

Gene Summary

Adenine Count

964799 bp

Thymine Count

983255 bp

Guanine Count

1673497 bp

Cytosine Count

1646357 bp

Genome Length

5270473 bp

Protein-coding Genes

4737 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i restriction enzyme, r subunitSAMN05216190_13536Not AvailablePositive4536105 - 4539389123105.0
hypothetical proteinSAMN05216190_13537Not AvailablePositive4539403 - 454011327694.3
reverse transcriptase (rna-dependent dna polymerase)SAMN05216190_13538Not AvailablePositive4540379 - 454187557356.3
putative exonuclease sbccd, c subunitSAMN05216190_13539Not AvailablePositive4541930 - 454292237462.0
hypothetical proteinSAMN05216190_13540Not AvailablePositive4542922 - 454411245100.8
hypothetical proteinSAMN05216190_13541Not AvailablePositive4544204 - 454475819894.0
transposaseSAMN05216190_13542Not AvailablePositive4544804 - 45450509027.98
integrase core domain-containing proteinSAMN05216190_1361Not AvailableNegative4545051 - 454563422228.8
predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domainsSAMN05216190_1362Not AvailablePositive4545959 - 454683433486.6
smi1-knr4 cell-wallSAMN05216190_1363Not AvailableNegative4547253 - 454766015280.2

Displaying genes 4061 – 4070 of 4800 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.