Pseudomonas borbori strain DSM 17834

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas borbori strain DSM 17834 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain thrives optimally at a temperature of 25°C, indicating its classification as mesophilic, as it grows well within a moderate temperature range. Notably, Pseudomonas borbori is non-spore-forming, which means it does not produce spores as a means of survival under adverse conditions. The strain possesses a single replicon, contributing to its genetic stability and cellular replication processes. The genomic data for Pseudomonas borbori is accessible under the accession number FOWX00000000.1, which allows for further research and exploration of its genetic characteristics and potential applications. In terms of ecological significance, members of the Pseudomonas genus are often known for their versatility in various environments, including soil and water. They play a crucial role in biogeochemical cycles, particularly in the degradation of organic pollutants. Understanding the traits of Pseudomonas borbori strain DSM 17834 can aid in comprehending its ecological role and potential use in bioremediation efforts, where its aerobic metabolism might be leveraged to break down environmental contaminants effectively.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas borbori
Strainstrain DSM 17834

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas borbori strain DSM 17834
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas borbori strain DSM 17834 genome assembly, contig:

Gene Summary

Adenine Count

964799 bp

Thymine Count

983255 bp

Guanine Count

1673497 bp

Cytosine Count

1646357 bp

Genome Length

5270473 bp

Protein-coding Genes

4737 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized membrane protein yckc, rdd familySAMN05216190_13170Not AvailablePositive4325173 - 432567318692.1
insertion element 4 transposase n-terminalSAMN05216190_13171Not AvailablePositive4325786 - 43260108439.51
glycine hydroxymethyltransferaseSAMN05216190_1321Not AvailablePositive4326011 - 432670324271.4
sarcosine oxidase subunit betaSAMN05216190_1322Not AvailablePositive4326845 - 432809545433.4
sarcosine oxidase subunit deltaSAMN05216190_1323Not AvailablePositive4328151 - 432847712232.4
sarcosine oxidase subunit alphaSAMN05216190_1324Not AvailablePositive4328474 - 4331491108905.0
sarcosine oxidase subunit gammaSAMN05216190_1325Not AvailablePositive4331484 - 433211322663.2
formyltetrahydrofolate deformylaseSAMN05216190_1326Not AvailablePositive4332233 - 433309632784.1
glutathione-independent formaldehyde dehydrogenaseSAMN05216190_1327Not AvailablePositive4333274 - 433447342212.9
acyl-coa thioester hydrolaseSAMN05216190_1328Not AvailableNegative4334547 - 433503217962.7

Displaying genes 3871 – 3880 of 4800 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.