Pseudomonas borbori strain DSM 17834

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas borbori strain DSM 17834 is a Gram-negative, aerobic bacterium characterized by its rod shape. This strain thrives optimally at a temperature of 25°C, indicating its classification as mesophilic, as it grows well within a moderate temperature range. Notably, Pseudomonas borbori is non-spore-forming, which means it does not produce spores as a means of survival under adverse conditions. The strain possesses a single replicon, contributing to its genetic stability and cellular replication processes. The genomic data for Pseudomonas borbori is accessible under the accession number FOWX00000000.1, which allows for further research and exploration of its genetic characteristics and potential applications. In terms of ecological significance, members of the Pseudomonas genus are often known for their versatility in various environments, including soil and water. They play a crucial role in biogeochemical cycles, particularly in the degradation of organic pollutants. Understanding the traits of Pseudomonas borbori strain DSM 17834 can aid in comprehending its ecological role and potential use in bioremediation efforts, where its aerobic metabolism might be leveraged to break down environmental contaminants effectively.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas borbori
Strainstrain DSM 17834

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas borbori strain DSM 17834
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas borbori strain DSM 17834 genome assembly, contig:

Gene Summary

Adenine Count

964799 bp

Thymine Count

983255 bp

Guanine Count

1673497 bp

Cytosine Count

1646357 bp

Genome Length

5270473 bp

Protein-coding Genes

4737 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05216190_12557Not AvailablePositive3858868 - 385966828089.5
crotonobetaine/carnitine-coa ligaseSAMN05216190_12558Not AvailableNegative3859957 - 386158859517.1
transcriptional regulator, tetr familySAMN05216190_12559Not AvailablePositive3861768 - 386249927255.1
predicted metal-dependent hydrolase, tim-barrel foldSAMN05216190_12560Not AvailablePositive3862851 - 386392740319.8
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)SAMN05216190_12561Not AvailablePositive3863927 - 386478130177.1
3-hydroxyacyl-coa dehydrogenaseSAMN05216190_12562Not AvailablePositive3864794 - 386569931870.7
acetyl-coa acetyltransferasesSAMN05216190_12563Not AvailablePositive3865696 - 386686840954.0
hypothetical proteinSAMN05216190_12564Not AvailablePositive3866871 - 386737418738.7
cytochrome p450SAMN05216190_12565Not AvailablePositive3867535 - 386880947475.0
predicted metal-dependent hydrolase, tim-barrel foldSAMN05216190_12566Not AvailablePositive3868978 - 387028548771.5

Displaying genes 3461 – 3470 of 4800 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.