Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, asnc family | SAMN05443579_101979 | Not Available | Negative | 1072730 - 1073200 | 17424.3 |
| putative abc transport system substrate-binding protein | SAMN05443579_101980 | Not Available | Positive | 1073405 - 1074379 | 33049.0 |
| putative abc transport system permease protein | SAMN05443579_101981 | Not Available | Positive | 1074456 - 1075352 | 30977.2 |
| putative abc transport system atp-binding protein | SAMN05443579_101982 | Not Available | Positive | 1075352 - 1076146 | 29078.6 |
| ribosomal protein s18 acetylase rimi | SAMN05443579_101983 | Not Available | Positive | 1076143 - 1076643 | 17550.0 |
| hypothetical protein | SAMN05443579_101984 | Not Available | Negative | 1076654 - 1076932 | 9890.49 |
| glutamyl-trna reductase | SAMN05443579_101985 | Not Available | Positive | 1077026 - 1078297 | 45620.9 |
| bacterial peptide chain release factor 1 (brf-1) | SAMN05443579_101986 | Not Available | Positive | 1078355 - 1079482 | 41777.3 |
| release factor glutamine methyltransferase | SAMN05443579_101987 | Not Available | Positive | 1079479 - 1080330 | 30049.9 |
| monothiol glutaredoxin | SAMN05443579_101988 | Not Available | Positive | 1080360 - 1080686 | 11822.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
