Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf971 family protein | SAMN05443579_101969 | Not Available | Negative | 1058808 - 1059221 | 14755.2 |
| diadenosine tetraphosphate (ap4a) hydrolase | SAMN05443579_101970 | Not Available | Negative | 1059286 - 1059732 | 16142.3 |
| fe-s oxidoreductase | SAMN05443579_101971 | Not Available | Negative | 1059729 - 1063607 | 142470.0 |
| d-3-phosphoglycerate dehydrogenase | SAMN05443579_101972 | Not Available | Negative | 1063746 - 1064978 | 43783.9 |
| carbohydrate abc transporter substrate-binding protein, cut1 family | SAMN05443579_101973 | Not Available | Positive | 1065210 - 1066523 | 47693.4 |
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05443579_101974 | Not Available | Positive | 1066651 - 1067532 | 32995.7 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05443579_101975 | Not Available | Positive | 1067596 - 1068444 | 31013.0 |
| carbohydrate abc transporter atp-binding protein, cut1 family | SAMN05443579_101976 | Not Available | Positive | 1068462 - 1069469 | 36992.1 |
| glycerophosphoryl diester phosphodiesterase | SAMN05443579_101977 | Not Available | Positive | 1069477 - 1070217 | 26608.7 |
| small-conductance mechanosensitive channel | SAMN05443579_101978 | Not Available | Positive | 1070288 - 1072711 | 84980.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
