Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin ccdb | SAMN05443579_101959 | Not Available | Negative | 1049561 - 1049872 | 11071.6 |
| prevent-host-death family protein | SAMN05443579_101960 | Not Available | Negative | 1049873 - 1050154 | 10789.9 |
| aspartyl-trna synthetase | SAMN05443579_101961 | Not Available | Negative | 1050219 - 1052030 | 67553.4 |
| uncharacterized membrane protein | SAMN05443579_101962 | Not Available | Negative | 1052066 - 1052701 | 23006.3 |
| putative regulatory protein, fmdb family | SAMN05443579_101963 | Not Available | Negative | 1052744 - 1053070 | 10538.3 |
| transporter, sss family | SAMN05443579_101964 | Not Available | Negative | 1053177 - 1054625 | 52029.1 |
| 2-octaprenylphenol hydroxylase | SAMN05443579_101965 | Not Available | Negative | 1054701 - 1056266 | 59987.6 |
| ubiquinone biosynthesis protein ubij | SAMN05443579_101966 | Not Available | Negative | 1056263 - 1056829 | 20542.6 |
| predicted lipid-binding transport protein, tim44 family | SAMN05443579_101967 | Not Available | Negative | 1056881 - 1057897 | 34351.8 |
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN05443579_101968 | Not Available | Negative | 1057929 - 1058660 | 26745.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
