Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05443579_101949 | Not Available | Positive | 1043217 - 1043753 | 19408.2 |
| bacterioferritin | SAMN05443579_101950 | Not Available | Positive | 1043750 - 1044304 | 20547.9 |
| bon domain-containing protein | SAMN05443579_101951 | Not Available | Negative | 1044389 - 1044895 | 17000.9 |
| uncharacterized conserved protein yjbj, upf0337 family | SAMN05443579_101952 | Not Available | Negative | 1044964 - 1045161 | 6758.01 |
| hypothetical protein | SAMN05443579_101953 | Not Available | Negative | 1045309 - 1046154 | 30401.5 |
| uncharacterized membrane protein | SAMN05443579_101954 | Not Available | Negative | 1046158 - 1047039 | 31512.4 |
| sensors of blue-light using fad | SAMN05443579_101955 | Not Available | Negative | 1047114 - 1047536 | 15409.7 |
| gtp cyclohydrolase i | SAMN05443579_101956 | Not Available | Negative | 1047538 - 1048269 | 27624.6 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05443579_101957 | Not Available | Negative | 1048343 - 1049098 | 28553.4 |
| datp pyrophosphohydrolase | SAMN05443579_101958 | Not Available | Negative | 1049095 - 1049583 | 18154.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
