Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase | SAMN05443579_101939 | Not Available | Positive | 1034045 - 1034788 | 27760.8 |
| c-terminal processing peptidase-3. serine peptidase. merops family s41a | SAMN05443579_101940 | Not Available | Positive | 1034898 - 1036340 | 52181.5 |
| molybdopterin or thiamine biosynthesis adenylyltransferase | SAMN05443579_101941 | Not Available | Positive | 1036433 - 1037197 | 26624.0 |
| hypothetical protein | SAMN05443579_101942 | Not Available | Negative | 1037214 - 1039232 | 71156.2 |
| response regulator receiver domain-containing protein | SAMN05443579_101943 | Not Available | Positive | 1039515 - 1039913 | 14687.5 |
| two component transcriptional regulator, luxr family | SAMN05443579_101944 | Not Available | Negative | 1039938 - 1040570 | 23252.2 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05443579_101945 | Not Available | Positive | 1040678 - 1042012 | 49299.3 |
| protein of unknown function | SAMN05443579_101946 | Not Available | Positive | 1042226 - 1042390 | 5550.25 |
| membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, elab/yqjd/duf883 family | SAMN05443579_101947 | Not Available | Positive | 1042442 - 1042813 | 13194.3 |
| hypothetical protein | SAMN05443579_101948 | Not Available | Positive | 1042847 - 1043230 | 13258.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
