Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginase | SAMN05443579_101929 | Not Available | Negative | 1025907 - 1026839 | 33096.9 |
| ornithine cyclodeaminase | SAMN05443579_101930 | Not Available | Negative | 1026902 - 1028008 | 39751.6 |
| transcriptional regulator, asnc family | SAMN05443579_101931 | Not Available | Positive | 1028126 - 1028584 | 16518.0 |
| 5'-nucleotidase, lipoprotein e(p4) family | SAMN05443579_101932 | Not Available | Positive | 1028719 - 1029573 | 32098.9 |
| quinolinate synthetase | SAMN05443579_101933 | Not Available | Negative | 1029583 - 1030698 | 39663.4 |
| nicotinate-nucleotide pyrophosphorylase | SAMN05443579_101934 | Not Available | Negative | 1030712 - 1031587 | 31010.3 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | SAMN05443579_101935 | Not Available | Negative | 1031613 - 1032641 | 34933.2 |
| protein translocase subunit secb | SAMN05443579_101936 | Not Available | Negative | 1032671 - 1033135 | 16856.2 |
| glutaredoxin 3 | SAMN05443579_101937 | Not Available | Negative | 1033266 - 1033532 | 9705.93 |
| rhodanese-related sulfurtransferase | SAMN05443579_101938 | Not Available | Negative | 1033553 - 1033969 | 14638.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
