Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, luxr family | SAMN05443579_101919 | Not Available | Negative | 1017243 - 1018013 | 27160.0 |
| beta-barrel assembly machine subunit bame | SAMN05443579_101920 | Not Available | Negative | 1018059 - 1018565 | 18862.5 |
| protein of unknown function | SAMN05443579_101921 | Not Available | Positive | 1018607 - 1018813 | 8068.61 |
| condensin subunit scpa | SAMN05443579_101922 | Not Available | Positive | 1018889 - 1019731 | 32124.3 |
| l-aspartate oxidase | SAMN05443579_101923 | Not Available | Positive | 1019856 - 1021445 | 56741.5 |
| ketopantoate hydroxymethyltransferase | SAMN05443579_101924 | Not Available | Positive | 1021516 - 1022409 | 31197.7 |
| pantothenate synthetase | SAMN05443579_101925 | Not Available | Positive | 1022455 - 1023306 | 31085.4 |
| 7-carboxy-7-deazaguanine synthase, cx14cxxc type | SAMN05443579_101926 | Not Available | Positive | 1023303 - 1023941 | 23007.4 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN05443579_101927 | Not Available | Positive | 1023970 - 1024332 | 13761.5 |
| lysine:proton symporter, aat family | SAMN05443579_101928 | Not Available | Negative | 1024263 - 1025816 | 56096.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
