Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05443579_101899 | Not Available | Positive | 995247 - 995537 | 10706.5 |
| nitroreductase | SAMN05443579_101900 | Not Available | Positive | 995555 - 996184 | 22797.3 |
| pp_00889 | SAMN05443579_101901 | Not Available | Negative | 996181 - 996678 | Not Available |
| molybdate transport system regulatory protein | SAMN05443579_101902 | Not Available | Negative | 996675 - 997022 | 12154.8 |
| hypothetical protein | SAMN05443579_101903 | Not Available | Positive | 997193 - 997768 | 19475.5 |
| major facilitator superfamily protein | SAMN05443579_101904 | Not Available | Negative | 997803 - 999494 | 59647.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05443579_101905 | Not Available | Negative | 999644 - 1000591 | 33975.7 |
| atp-binding protein involved in chromosome partitioning | SAMN05443579_101906 | Not Available | Negative | 1000940 - 1002031 | 38159.3 |
| nte family protein | SAMN05443579_101907 | Not Available | Positive | 1002108 - 1003325 | 43029.9 |
| hypothetical protein | SAMN05443579_101908 | Not Available | Negative | 1003337 - 1004017 | 24193.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
