Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate transport system permease protein | SAMN05443579_101889 | Not Available | Positive | 985323 - 986117 | 27786.7 |
| trna 2-selenouridine synthase | SAMN05443579_101890 | Not Available | Positive | 986156 - 987226 | 39458.5 |
| fdhd protein | SAMN05443579_101891 | Not Available | Negative | 987160 - 988068 | 31554.1 |
| hypothetical protein | SAMN05443579_101892 | Not Available | Negative | 988130 - 988426 | 10049.1 |
| oxidoreductase alpha (molybdopterin) subunit | SAMN05443579_101893 | Not Available | Negative | 988441 - 990813 | 87002.3 |
| dna-binding transcriptional regulator, lysr family | SAMN05443579_101894 | Not Available | Negative | 990910 - 991824 | 32438.4 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05443579_101895 | Not Available | Positive | 991934 - 992794 | 30640.2 |
| molybdate transport system atp-binding protein | SAMN05443579_101896 | Not Available | Negative | 992801 - 993592 | 28733.6 |
| molybdate transport system substrate-binding protein | SAMN05443579_101897 | Not Available | Negative | 993589 - 994353 | 26786.2 |
| molybdate transport system permease protein | SAMN05443579_101898 | Not Available | Negative | 994372 - 995169 | 28954.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
