Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-seryl-trna(sec) selenium transferase | SAMN05443579_101879 | Not Available | Positive | 974545 - 975993 | 50785.0 |
| acyl-coa dehydrogenase | SAMN05443579_101880 | Not Available | Positive | 976291 - 977406 | 38664.4 |
| abc-type phosphate/phosphonate transport system, substrate-binding protein | SAMN05443579_101881 | Not Available | Positive | 977417 - 978277 | 31449.3 |
| p-aminobenzoate n-oxygenase aurf | SAMN05443579_101882 | Not Available | Positive | 978243 - 979448 | 43636.0 |
| selenocysteine-specific translation elongation factor selb | SAMN05443579_101883 | Not Available | Positive | 979459 - 981366 | 68289.1 |
| Trna-sec | Not Available | Not Available | Positive | 981383 - 981472 | Not Available |
| selenophosphate synthase | SAMN05443579_101885 | Not Available | Negative | 981624 - 982703 | 36994.8 |
| phosphonate transport system substrate-binding protein | SAMN05443579_101886 | Not Available | Positive | 982813 - 983667 | 30470.7 |
| phosphonate transport system atp-binding protein | SAMN05443579_101887 | Not Available | Positive | 983690 - 984502 | 28421.5 |
| phosphonate transport system permease protein | SAMN05443579_101888 | Not Available | Positive | 984499 - 985326 | 28719.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
