Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate permease | SAMN05443579_101868 | Not Available | Negative | 961466 - 963037 | 52672.3 |
| dna-binding transcriptional regulator, lysr family | SAMN05443579_101869 | Not Available | Positive | 963194 - 964099 | 33287.4 |
| aaa domain-containing protein, putative abieii toxin, type iv ta system | SAMN05443579_101870 | Not Available | Negative | 964101 - 965582 | 53025.0 |
| putative abc transport system permease protein | SAMN05443579_101871 | Not Available | Negative | 965694 - 968210 | 89100.9 |
| hypothetical protein | SAMN05443579_101872 | Not Available | Positive | 968419 - 968712 | 8684.14 |
| formate dehydrogenase (quinone-dependent) catalytic subunit | SAMN05443579_101873 | Not Available | Positive | 968801 - 969388 | 21366.5 |
| formate dehydrogenase (quinone-dependent) catalytic subunit | SAMN05443579_101875 | Not Available | Positive | 969437 - 971878 | 90687.0 |
| formate dehydrogenase (quinone-dependent) iron-sulfur subunit | SAMN05443579_101876 | Not Available | Positive | 971882 - 972859 | 35026.8 |
| formate dehydrogenase subunit gamma | SAMN05443579_101877 | Not Available | Positive | 972856 - 973479 | 23916.9 |
| tat proofreading chaperone fdhe | SAMN05443579_101878 | Not Available | Positive | 973529 - 974545 | 37006.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
