Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bo3 quinol oxidase subunit 3 | SAMN05443579_101858 | Not Available | Positive | 953812 - 954480 | 24328.9 |
| cytochrome o ubiquinol oxidase operon protein cyod | SAMN05443579_101859 | Not Available | Positive | 954477 - 954887 | 15037.6 |
| surfeit locus 1 family protein | SAMN05443579_101860 | Not Available | Positive | 954884 - 955738 | 30631.4 |
| two-component system, sensor histidine kinase regb | SAMN05443579_101861 | Not Available | Positive | 955722 - 957107 | 49946.7 |
| two-component system, response regulator rega | SAMN05443579_101862 | Not Available | Positive | 957088 - 957657 | 20722.6 |
| hemolysin iii | SAMN05443579_101863 | Not Available | Positive | 957722 - 958417 | 24764.7 |
| slyx protein | SAMN05443579_101864 | Not Available | Negative | 958439 - 958663 | 8391.85 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05443579_101865 | Not Available | Negative | 958736 - 959632 | 31611.0 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05443579_101866 | Not Available | Negative | 959662 - 960405 | 25887.9 |
| transcriptional regulator, lysr family | SAMN05443579_101867 | Not Available | Positive | 960529 - 961434 | 33189.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
