Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| seryl-trna synthetase | SAMN05443579_101838 | Not Available | Negative | 933492 - 934823 | 48410.9 |
| threonine dehydratase | SAMN05443579_101839 | Not Available | Negative | 934874 - 935839 | 33229.2 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN05443579_101840 | Not Available | Negative | 935836 - 936804 | 34999.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slpa | SAMN05443579_101841 | Not Available | Negative | 936836 - 937288 | 15961.8 |
| dna repair protein radc | SAMN05443579_101842 | Not Available | Positive | 937396 - 938073 | 24576.0 |
| dna-nicking endonuclease, smr domain | SAMN05443579_101843 | Not Available | Positive | 938073 - 938762 | 24906.1 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase | SAMN05443579_101844 | Not Available | Negative | 938794 - 940911 | 74334.1 |
| 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit | SAMN05443579_101845 | Not Available | Negative | 941021 - 942244 | 42671.1 |
| hemoglobin | SAMN05443579_101846 | Not Available | Negative | 942273 - 942692 | 16192.2 |
| enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-coa reductase (nad+) | SAMN05443579_101847 | Not Available | Negative | 942696 - 943898 | 42695.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
