Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein yece, duf72 family | SAMN05443579_101828 | Not Available | Negative | 923186 - 924154 | 36030.3 |
| 2,2-dialkylglycine decarboxylase (pyruvate) | SAMN05443579_101829 | Not Available | Negative | 924383 - 925705 | 47363.1 |
| transcriptional regulator, lysr family | SAMN05443579_101830 | Not Available | Positive | 925800 - 926657 | 30216.8 |
| hypothetical protein | SAMN05443579_101831 | Not Available | Positive | 926747 - 926941 | 6593.44 |
| transcriptional regulator, tetr family | SAMN05443579_101832 | Not Available | Negative | 926964 - 927548 | 20725.9 |
| glutamate carboxypeptidase | SAMN05443579_101833 | Not Available | Negative | 927622 - 928887 | 44618.3 |
| hypothetical protein | SAMN05443579_101834 | Not Available | Negative | 929091 - 930161 | 38297.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05443579_101835 | Not Available | Positive | 930392 - 931390 | 36885.8 |
| hypothetical protein | SAMN05443579_101836 | Not Available | Negative | 931542 - 933317 | 64964.7 |
| Trna-ser | Not Available | Not Available | Positive | 933321 - 933410 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
