Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative flavoprotein involved in k+ transport | SAMN05443579_101818 | Not Available | Positive | 913563 - 914888 | 48873.7 |
| methyltransferase domain-containing protein | SAMN05443579_101819 | Not Available | Positive | 914967 - 916010 | 39450.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05443579_101820 | Not Available | Negative | 916012 - 916992 | 35796.6 |
| predicted arabinose efflux permease, mfs family | SAMN05443579_101821 | Not Available | Positive | 917115 - 918344 | 41408.6 |
| d-alanyl-d-alanine carboxypeptidase | SAMN05443579_101822 | Not Available | Negative | 918361 - 919236 | 30397.6 |
| hypothetical protein | SAMN05443579_101823 | Not Available | Negative | 919310 - 919636 | 11575.2 |
| hypothetical protein | SAMN05443579_101824 | Not Available | Negative | 919767 - 920150 | 13177.0 |
| hypothetical protein | SAMN05443579_101825 | Not Available | Negative | 920183 - 920701 | 18610.5 |
| hypothetical protein | SAMN05443579_101826 | Not Available | Negative | 920748 - 921485 | 26203.5 |
| nramp (natural resistance-associated macrophage protein) metal ion transporters | SAMN05443579_101827 | Not Available | Negative | 921762 - 923069 | 46113.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
