Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN05443579_101808 | Not Available | Negative | 903939 - 905357 | 52178.6 |
| catechol 2,3-dioxygenase | SAMN05443579_101809 | Not Available | Positive | 905556 - 905948 | 14180.8 |
| transcriptional regulator, gntr family | SAMN05443579_101810 | Not Available | Negative | 905949 - 907376 | 51163.6 |
| msmeg_0572 family protein | SAMN05443579_101811 | Not Available | Positive | 907733 - 908215 | 17692.4 |
| aliphatic nitrilase | SAMN05443579_101812 | Not Available | Positive | 908359 - 909438 | 38777.3 |
| radical sam protein, msmeg_0568 family | SAMN05443579_101813 | Not Available | Positive | 909401 - 910471 | 37766.6 |
| putative n-acetyltransferase, msmeg_0567 n-terminal domain family | SAMN05443579_101814 | Not Available | Positive | 910473 - 911033 | 20687.9 |
| hypothetical protein | SAMN05443579_101815 | Not Available | Positive | 911030 - 912043 | 35487.8 |
| glycosyltransferase, msmeg_0565 family | SAMN05443579_101816 | Not Available | Positive | 912036 - 913256 | 44076.8 |
| msmeg_0570 family protein | SAMN05443579_101817 | Not Available | Positive | 913247 - 913525 | 10417.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
