Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05443579_101788 | Not Available | Negative | 883432 - 884658 | 44481.2 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05443579_101789 | Not Available | Negative | 884655 - 886202 | 54410.8 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05443579_101790 | Not Available | Negative | 886293 - 887561 | 46006.3 |
| ntp pyrophosphatase, house-cleaning of non-canonical ntps | SAMN05443579_101791 | Not Available | Negative | 887704 - 888018 | 11718.0 |
| hypothetical protein | SAMN05443579_101792 | Not Available | Positive | 888091 - 888699 | 21986.6 |
| hypothetical protein | SAMN05443579_101793 | Not Available | Positive | 888683 - 889111 | 15426.6 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05443579_101794 | Not Available | Negative | 889273 - 890739 | 50119.9 |
| snoal-like domain-containing protein | SAMN05443579_101795 | Not Available | Negative | 890799 - 891185 | 14134.8 |
| arac-type dna-binding protein | SAMN05443579_101796 | Not Available | Positive | 891301 - 892227 | 32388.1 |
| esterase, phb depolymerase family | SAMN05443579_101797 | Not Available | Negative | 892237 - 893283 | 37134.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
