Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN05443579_10167 | Not Available | Negative | 67874 - 68845 | 37050.0 |
| microcin-processing peptidase 1. unknown type peptidase. merops family u62 | SAMN05443579_10168 | Not Available | Negative | 68916 - 70286 | 48287.8 |
| ribosome-associated protein | SAMN05443579_10169 | Not Available | Positive | 70392 - 71048 | 24289.8 |
| molybdopterin adenylyltransferase | SAMN05443579_10170 | Not Available | Positive | 71045 - 71635 | 20933.4 |
| hypothetical protein | SAMN05443579_10171 | Not Available | Negative | 71632 - 72006 | 13474.0 |
| cobalt-zinc-cadmium efflux system protein | SAMN05443579_10172 | Not Available | Negative | 72065 - 72967 | 32239.4 |
| cobalt-zinc-cadmium resistance protein czca | SAMN05443579_10173 | Not Available | Negative | 72957 - 76220 | 117263.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN05443579_10174 | Not Available | Negative | 76230 - 77663 | 50399.2 |
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN05443579_10175 | Not Available | Negative | 77672 - 79066 | 49211.5 |
| hypothetical protein | SAMN05443579_10176 | Not Available | Negative | 79171 - 79548 | 13515.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
