Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05443579_101778 | Not Available | Positive | 872868 - 873926 | 39357.4 |
| alpha/beta hydrolase family protein | SAMN05443579_101779 | Not Available | Positive | 873929 - 875851 | 69945.4 |
| mfs transporter, dha1 family, inner membrane transport protein | SAMN05443579_101780 | Not Available | Negative | 875862 - 877115 | 42350.8 |
| enoyl-coa hydratase/carnithine racemase | SAMN05443579_101781 | Not Available | Negative | 877234 - 877992 | 26800.2 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05443579_101782 | Not Available | Negative | 877989 - 878942 | 33871.8 |
| coa:oxalate coa-transferase | SAMN05443579_101783 | Not Available | Negative | 878980 - 880140 | 41237.5 |
| enoyl-coa hydratase | SAMN05443579_101784 | Not Available | Negative | 880144 - 880929 | 27966.6 |
| transcriptional regulator, iclr family | SAMN05443579_101785 | Not Available | Positive | 881026 - 881847 | 29625.9 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05443579_101786 | Not Available | Negative | 881852 - 882544 | 25254.2 |
| urea transport system atp-binding protein | SAMN05443579_101787 | Not Available | Negative | 882557 - 883435 | 31793.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
