Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN05443579_101728 | Not Available | Positive | 819861 - 820988 | 40594.6 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05443579_101729 | Not Available | Negative | 821005 - 821886 | 30396.7 |
| transcriptional regulator, hxlr family | SAMN05443579_101730 | Not Available | Positive | 822010 - 822369 | 13383.4 |
| d-alanyl-d-alanine carboxypeptidase | SAMN05443579_101731 | Not Available | Positive | 822380 - 823579 | 42674.3 |
| putative redox protein | SAMN05443579_101732 | Not Available | Negative | 823592 - 823993 | 14636.3 |
| ribosomal protein s18 acetylase rimi | SAMN05443579_101733 | Not Available | Negative | 824020 - 824502 | 18008.3 |
| transcriptional regulator, asnc family | SAMN05443579_101734 | Not Available | Negative | 824527 - 824994 | 17522.5 |
| d-amino-acid dehydrogenase | SAMN05443579_101735 | Not Available | Positive | 825124 - 826425 | 46994.3 |
| phenylpropionate dioxygenase, large terminal subunit | SAMN05443579_101736 | Not Available | Negative | 826430 - 827509 | 40839.4 |
| abc-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein | SAMN05443579_101737 | Not Available | Positive | 827883 - 828911 | 37072.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
