Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05443579_101688 | Not Available | Positive | 777353 - 777787 | 14885.0 |
| acetyl-coa acetyltransferase | SAMN05443579_101689 | Not Available | Positive | 777784 - 778947 | 40074.0 |
| short chain enoyl-coa hydratase | SAMN05443579_101690 | Not Available | Positive | 778977 - 779783 | 29207.4 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05443579_101691 | Not Available | Positive | 779834 - 780649 | 27984.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05443579_101692 | Not Available | Positive | 780741 - 781922 | 42502.6 |
| hypothetical protein | SAMN05443579_101693 | Not Available | Positive | 782013 - 782321 | 11165.9 |
| dna end-binding protein ku | SAMN05443579_101694 | Not Available | Positive | 782354 - 783280 | 33671.8 |
| hypothetical protein | SAMN05443579_101695 | Not Available | Positive | 783328 - 783975 | 22979.0 |
| hypothetical protein | SAMN05443579_101696 | Not Available | Negative | 783988 - 784386 | 15033.3 |
| two component transcriptional regulator, luxr family | SAMN05443579_101697 | Not Available | Positive | 784519 - 785145 | 22187.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
