Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PDC80 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1362819 bp
Thymine Count
1362565 bp
Guanine Count
3114901 bp
Cytosine Count
3122091 bp
Genome Length
8962376 bp
Protein-coding Genes
8074 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative mg2+ transporter-c (mgtc) family protein | SAMN05443579_101648 | Not Available | Positive | 730021 - 730737 | 25156.0 |
| 2,5-dioxopentanoate dehydrogenase (nad+) | SAMN05443579_101649 | Not Available | Negative | 730817 - 732262 | 50635.8 |
| hydroxypyruvate reductase | SAMN05443579_101650 | Not Available | Negative | 732530 - 733885 | 46788.9 |
| uncharacterized membrane protein | SAMN05443579_101651 | Not Available | Negative | 733950 - 735158 | 45271.2 |
| xanthine dehydrogenase accessory factor | SAMN05443579_101652 | Not Available | Negative | 735397 - 736203 | 28680.6 |
| hypothetical protein | SAMN05443579_101653 | Not Available | Positive | 736257 - 736757 | 17904.2 |
| 5-hydroxyisourate hydrolase | SAMN05443579_101654 | Not Available | Negative | 736820 - 737170 | 12579.8 |
| dna-binding transcriptional regulator, gntr family | SAMN05443579_101655 | Not Available | Positive | 737255 - 737929 | 24806.1 |
| putative urate catabolism protein | SAMN05443579_101656 | Not Available | Positive | 737941 - 738900 | 36719.4 |
| n-carbamoyl-l-amino-acid hydrolase | SAMN05443579_101657 | Not Available | Positive | 738924 - 740705 | 64877.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
